Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rc3h1Q4VGL6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.46■□□□□ 0.23
Rc3h1Q4VGL6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rc3h1Q4VGL6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rc3h1Q4VGL6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rc3h1Q4VGL6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Gm28760-201ENSMUST00000185995 736 ntBASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Gm21470-201ENSMUST00000187680 696 ntBASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rc3h1Q4VGL6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.44■□□□□ 0.22
Rc3h1Q4VGL6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms