Protein–RNA interactions for Protein: Q3ZN08

Fam220a, Protein FAM220A, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam220aQ3ZN08 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam220aQ3ZN08 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.47
Fam220aQ3ZN08 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Fam220aQ3ZN08 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Fam220aQ3ZN08 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Fam220aQ3ZN08 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms