Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Usp30Q3UN04 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp30Q3UN04 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Usp30Q3UN04 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.33□□□□□ -0.12
Usp30Q3UN04 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Gm44608-201ENSMUST00000206827 855 ntBASIC14.33□□□□□ -0.12
Usp30Q3UN04 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.33□□□□□ -0.12
Usp30Q3UN04 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Usp30Q3UN04 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Gm12091-201ENSMUST00000146791 830 ntBASIC14.32□□□□□ -0.12
Usp30Q3UN04 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.32□□□□□ -0.12
Usp30Q3UN04 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp30Q3UN04 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.31□□□□□ -0.12
Usp30Q3UN04 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.31□□□□□ -0.12
Usp30Q3UN04 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Usp30Q3UN04 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Usp30Q3UN04 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp30Q3UN04 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms