Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.01□□□□□ -0.33
Spg11Q3UHA3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm45219-201ENSMUST00000205602 465 ntBASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Spg11Q3UHA3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Gm14730-201ENSMUST00000122378 1045 ntBASIC13□□□□□ -0.33
Spg11Q3UHA3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Spg11Q3UHA3 AC124457.1-201ENSMUST00000198845 120 ntBASIC13□□□□□ -0.33
Spg11Q3UHA3 Gm7498-201ENSMUST00000203282 1084 ntBASIC13□□□□□ -0.33
Spg11Q3UHA3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13□□□□□ -0.33
Spg11Q3UHA3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Gm45606-201ENSMUST00000209836 2795 ntBASIC13□□□□□ -0.33
Spg11Q3UHA3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Gm11597-201ENSMUST00000121423 964 ntBASIC13□□□□□ -0.33
Spg11Q3UHA3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Gm28450-201ENSMUST00000187349 638 ntBASIC13□□□□□ -0.33
Spg11Q3UHA3 Gm37497-201ENSMUST00000195830 798 ntBASIC13□□□□□ -0.33
Spg11Q3UHA3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Spg11Q3UHA3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Spg11Q3UHA3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Mir6958-201ENSMUST00000184207 73 ntBASIC12.99□□□□□ -0.33
Spg11Q3UHA3 Gm44100-201ENSMUST00000204329 436 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms