Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Brf2Q3UAW9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Gm2810-201ENSMUST00000118681 990 ntBASIC13.46□□□□□ -0.25
Brf2Q3UAW9 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Gm11745-201ENSMUST00000121669 448 ntBASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Brf2Q3UAW9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Brf2Q3UAW9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Gm27494-201ENSMUST00000184735 189 ntBASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Brf2Q3UAW9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Mir1895-201ENSMUST00000122615 79 ntBASIC13.44□□□□□ -0.26
Brf2Q3UAW9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Gm38225-201ENSMUST00000194001 393 ntBASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.44□□□□□ -0.26
Brf2Q3UAW9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms