Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.39□□□□□ -0.43
Q3U1D9 Gm9522-201ENSMUST00000182394 926 ntBASIC12.39□□□□□ -0.43
Q3U1D9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.39□□□□□ -0.43
Q3U1D9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.39□□□□□ -0.43
Q3U1D9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.39□□□□□ -0.43
Q3U1D9 Gm5186-201ENSMUST00000218781 920 ntBASIC12.39□□□□□ -0.43
Q3U1D9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Q3U1D9 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.39□□□□□ -0.43
Q3U1D9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Q3U1D9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Q3U1D9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.39□□□□□ -0.43
Q3U1D9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Q3U1D9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.38□□□□□ -0.43
Q3U1D9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.38□□□□□ -0.43
Q3U1D9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Q3U1D9 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.38□□□□□ -0.43
Q3U1D9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.38□□□□□ -0.43
Q3U1D9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.38□□□□□ -0.43
Q3U1D9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.38□□□□□ -0.43
Q3U1D9 Gm28631-201ENSMUST00000190740 334 ntBASIC12.38□□□□□ -0.43
Q3U1D9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.38□□□□□ -0.43
Q3U1D9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Q3U1D9 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.38□□□□□ -0.43
Q3U1D9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Q3U1D9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Q3U1D9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Q3U1D9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Q3U1D9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Q3U1D9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Q3U1D9 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.38□□□□□ -0.43
Q3U1D9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Q3U1D9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.38□□□□□ -0.43
Q3U1D9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Q3U1D9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Q3U1D9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.37□□□□□ -0.43
Q3U1D9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Q3U1D9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Q3U1D9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Q3U1D9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.37□□□□□ -0.43
Q3U1D9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.37□□□□□ -0.43
Q3U1D9 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.37□□□□□ -0.43
Q3U1D9 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.37□□□□□ -0.43
Q3U1D9 Gm6218-201ENSMUST00000219812 628 ntBASIC12.37□□□□□ -0.43
Q3U1D9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.37□□□□□ -0.43
Q3U1D9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Q3U1D9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.37□□□□□ -0.43
Q3U1D9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Q3U1D9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms