Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gm11425-201ENSMUST00000119608 498 ntBASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gm5354-201ENSMUST00000182417 973 ntBASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gm5035-201ENSMUST00000215581 927 ntBASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gm9396-201ENSMUST00000076703 567 ntBASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Tmem88bQ3TYP4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tmem88bQ3TYP4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Gm27892-201ENSMUST00000185017 106 ntBASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Gm28911-201ENSMUST00000188837 117 ntBASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Gm33320-201ENSMUST00000192232 530 ntBASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tmem88bQ3TYP4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tmem88bQ3TYP4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tmem88bQ3TYP4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms