Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43aQ3TL54 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Gm5364-201ENSMUST00000216789 889 ntBASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43aQ3TL54 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43aQ3TL54 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Gm8000-201ENSMUST00000188378 592 ntBASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Gm37230-201ENSMUST00000194491 818 ntBASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Gm2272-201ENSMUST00000194903 582 ntBASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43aQ3TL54 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Acot6-202ENSMUST00000222921 3622 ntBASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim43aQ3TL54 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms