Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm5187-201ENSMUST00000117317 991 ntBASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim7Q3TJD7 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Gm24196-201ENSMUST00000179161 110 ntBASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Gm5370-201ENSMUST00000187187 574 ntBASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pdlim7Q3TJD7 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Gm13689-201ENSMUST00000119360 685 ntBASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Mir3102-201ENSMUST00000175555 104 ntBASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Gm27514-201ENSMUST00000183692 110 ntBASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Gm40466-201ENSMUST00000212174 422 ntBASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Gm10012-201ENSMUST00000078252 192 ntBASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.89■□□□□ 0.13
Pdlim7Q3TJD7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pdlim7Q3TJD7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms