Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Gm14005-208ENSMUST00000223654 681 ntBASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ush2AQ2QI47 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gm37028-201ENSMUST00000194276 107 ntBASIC7.38□□□□□ -1.23
Ush2AQ2QI47 AC073947.2-201ENSMUST00000215888 1130 ntBASIC7.38□□□□□ -1.23
Ush2AQ2QI47 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 AC134254.1-201ENSMUST00000221362 167 ntBASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gm44775-201ENSMUST00000207266 1456 ntBASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gm14034-201ENSMUST00000120147 551 ntBASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gm13875-201ENSMUST00000120162 282 ntBASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gm12899-201ENSMUST00000120565 551 ntBASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
Ush2AQ2QI47 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm11979-201ENSMUST00000119629 743 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 CT573086.1-201ENSMUST00000227202 1074 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm13549-201ENSMUST00000118339 796 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm44405-201ENSMUST00000198952 126 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm43416-201ENSMUST00000201916 1015 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm45433-201ENSMUST00000209386 247 ntBASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Ush2AQ2QI47 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms