Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ptchd3Q0EEE2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Gm27300-201ENSMUST00000184085 97 ntBASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Gm27335-201ENSMUST00000184758 97 ntBASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ptchd3Q0EEE2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ptchd3Q0EEE2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.78□□□□□ -0.2
Ptchd3Q0EEE2 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms