Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sox4Q06831 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.04□□□□□ -0.16
Sox4Q06831 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sox4Q06831 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sox4Q06831 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox4Q06831 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Gm12151-201ENSMUST00000121374 290 ntBASIC14.03□□□□□ -0.16
Sox4Q06831 Mir7023-201ENSMUST00000185093 64 ntBASIC14.03□□□□□ -0.16
Sox4Q06831 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.03□□□□□ -0.16
Sox4Q06831 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sox4Q06831 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox4Q06831 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sox4Q06831 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.03□□□□□ -0.16
Sox4Q06831 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.03□□□□□ -0.16
Sox4Q06831 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sox4Q06831 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sox4Q06831 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox4Q06831 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox4Q06831 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox4Q06831 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox4Q06831 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.02□□□□□ -0.16
Sox4Q06831 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox4Q06831 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.02□□□□□ -0.16
Sox4Q06831 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.02□□□□□ -0.16
Sox4Q06831 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.02□□□□□ -0.16
Sox4Q06831 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox4Q06831 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.02□□□□□ -0.17
Sox4Q06831 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.02□□□□□ -0.17
Sox4Q06831 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.02□□□□□ -0.17
Sox4Q06831 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.02□□□□□ -0.17
Sox4Q06831 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox4Q06831 Gm46209-201ENSMUST00000217912 553 ntBASIC14.02□□□□□ -0.17
Sox4Q06831 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox4Q06831 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sox4Q06831 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sox4Q06831 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox4Q06831 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox4Q06831 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sox4Q06831 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox4Q06831 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.01□□□□□ -0.17
Sox4Q06831 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox4Q06831 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox4Q06831 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox4Q06831 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox4Q06831 Gm27680-201ENSMUST00000184192 160 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms