Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Snord83b-201ENSMUST00000104546 94 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm8566-201ENSMUST00000120174 465 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm27682-201ENSMUST00000183930 110 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm6334-201ENSMUST00000207083 228 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.28□□□□□ -0.76
Hspg2Q05793 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm43133-201ENSMUST00000197472 463 ntBASIC10.28□□□□□ -0.76
Hspg2Q05793 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Hspg2Q05793 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Hspg2Q05793 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Hspg2Q05793 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hspg2Q05793 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hspg2Q05793 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hspg2Q05793 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hspg2Q05793 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hspg2Q05793 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.27□□□□□ -0.76
Hspg2Q05793 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Hspg2Q05793 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Hspg2Q05793 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm15957-201ENSMUST00000118893 974 ntBASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.77
Hspg2Q05793 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm12485-201ENSMUST00000119641 291 ntBASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.27□□□□□ -0.77
Hspg2Q05793 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Hspg2Q05793 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm8805-201ENSMUST00000117848 313 ntBASIC10.27□□□□□ -0.77
Hspg2Q05793 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Hspg2Q05793 Gm18473-201ENSMUST00000220543 868 ntBASIC10.27□□□□□ -0.77
Hspg2Q05793 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Hspg2Q05793 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.26□□□□□ -0.77
Hspg2Q05793 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.26□□□□□ -0.77
Hspg2Q05793 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Gm6082-201ENSMUST00000215204 454 ntBASIC10.26□□□□□ -0.77
Hspg2Q05793 Gm9368-201ENSMUST00000219348 831 ntBASIC10.26□□□□□ -0.77
Hspg2Q05793 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Hspg2Q05793 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.26□□□□□ -0.77
Hspg2Q05793 Gm37008-201ENSMUST00000195712 319 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms