Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Gm37230-201ENSMUST00000194491 818 ntBASIC14.36□□□□□ -0.11
Pfdn6Q03958 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.36□□□□□ -0.11
Pfdn6Q03958 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.36□□□□□ -0.11
Pfdn6Q03958 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.36□□□□□ -0.11
Pfdn6Q03958 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pfdn6Q03958 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.35□□□□□ -0.11
Pfdn6Q03958 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Rprl2-201ENSMUST00000157150 290 ntBASIC14.35□□□□□ -0.11
Pfdn6Q03958 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Gm18057-201ENSMUST00000208220 503 ntBASIC14.35□□□□□ -0.11
Pfdn6Q03958 Gm45612-201ENSMUST00000211320 160 ntBASIC14.35□□□□□ -0.11
Pfdn6Q03958 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.35□□□□□ -0.11
Pfdn6Q03958 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pfdn6Q03958 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pfdn6Q03958 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms