Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Npas1P97459 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12□□□□□ -0.49
Npas1P97459 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Gm38355-201ENSMUST00000192514 1570 ntBASIC12□□□□□ -0.49
Npas1P97459 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Npas1P97459 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12□□□□□ -0.49
Npas1P97459 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Npas1P97459 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Npas1P97459 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.99□□□□□ -0.49
Npas1P97459 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.99□□□□□ -0.49
Npas1P97459 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Npas1P97459 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.99□□□□□ -0.49
Npas1P97459 Gm18041-201ENSMUST00000218210 618 ntBASIC11.99□□□□□ -0.49
Npas1P97459 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.99□□□□□ -0.49
Npas1P97459 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Npas1P97459 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Npas1P97459 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Npas1P97459 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Npas1P97459 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.99□□□□□ -0.49
Npas1P97459 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Npas1P97459 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Npas1P97459 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.98□□□□□ -0.49
Npas1P97459 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.98□□□□□ -0.49
Npas1P97459 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC11.98□□□□□ -0.49
Npas1P97459 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC11.98□□□□□ -0.49
Npas1P97459 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Gm27704-201ENSMUST00000185094 107 ntBASIC11.98□□□□□ -0.49
Npas1P97459 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.98□□□□□ -0.49
Npas1P97459 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.98□□□□□ -0.49
Npas1P97459 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.98□□□□□ -0.49
Npas1P97459 Gm6296-201ENSMUST00000222599 943 ntBASIC11.98□□□□□ -0.49
Npas1P97459 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Npas1P97459 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Npas1P97459 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Npas1P97459 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Npas1P97459 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms