Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC9.51□□□□□ -0.89
PrkdcP97313 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.51□□□□□ -0.89
PrkdcP97313 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.51□□□□□ -0.89
PrkdcP97313 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
PrkdcP97313 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PrkdcP97313 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.51□□□□□ -0.89
PrkdcP97313 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
PrkdcP97313 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.51□□□□□ -0.89
PrkdcP97313 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.51□□□□□ -0.89
PrkdcP97313 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC9.51□□□□□ -0.89
PrkdcP97313 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.51□□□□□ -0.89
PrkdcP97313 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.51□□□□□ -0.89
PrkdcP97313 Carlr-201ENSMUST00000181515 2574 ntBASIC9.51□□□□□ -0.89
PrkdcP97313 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
PrkdcP97313 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
PrkdcP97313 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
PrkdcP97313 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
PrkdcP97313 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm13408-201ENSMUST00000119822 798 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 Gm13935-201ENSMUST00000121859 798 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC9.5□□□□□ -0.89
PrkdcP97313 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm8385-201ENSMUST00000058999 643 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
PrkdcP97313 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC9.5□□□□□ -0.89
PrkdcP97313 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
PrkdcP97313 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm12363-201ENSMUST00000122250 668 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 AC134254.1-201ENSMUST00000221362 167 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm37166-201ENSMUST00000195473 2474 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.5□□□□□ -0.89
PrkdcP97313 Gm9678-201ENSMUST00000198979 1149 ntBASIC9.5□□□□□ -0.89
PrkdcP97313 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
PrkdcP97313 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.5□□□□□ -0.89
PrkdcP97313 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.5□□□□□ -0.89
PrkdcP97313 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
PrkdcP97313 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC9.49□□□□□ -0.89
PrkdcP97313 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.49□□□□□ -0.89
PrkdcP97313 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
PrkdcP97313 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.49□□□□□ -0.89
PrkdcP97313 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms