Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.56□□□□□ -0.4
Hist1h3bP84228 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.56□□□□□ -0.4
Hist1h3bP84228 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.56□□□□□ -0.4
Hist1h3bP84228 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hist1h3bP84228 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.55□□□□□ -0.4
Hist1h3bP84228 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Gm11745-201ENSMUST00000121669 448 ntBASIC12.55□□□□□ -0.4
Hist1h3bP84228 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Gm27494-201ENSMUST00000184735 189 ntBASIC12.55□□□□□ -0.4
Hist1h3bP84228 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.55□□□□□ -0.4
Hist1h3bP84228 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.55□□□□□ -0.4
Hist1h3bP84228 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hist1h3bP84228 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hist1h3bP84228 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms