Protein–RNA interactions for Protein: P70388

Rad50, DNA repair protein RAD50, mousemouse

Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad50P70388 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Rad50P70388 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rad50P70388 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rad50P70388 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rad50P70388 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Gm12428-201ENSMUST00000119844 727 ntBASIC17.13■□□□□ 0.33
Rad50P70388 Gm25144-201ENSMUST00000179561 110 ntBASIC17.13■□□□□ 0.33
Rad50P70388 Gm25352-201ENSMUST00000179815 110 ntBASIC17.13■□□□□ 0.33
Rad50P70388 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rad50P70388 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.13■□□□□ 0.33
Rad50P70388 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rad50P70388 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad50P70388 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Gm6159-201ENSMUST00000191249 1724 ntBASIC17.12■□□□□ 0.33
Rad50P70388 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Gm13453-201ENSMUST00000118708 357 ntBASIC17.12■□□□□ 0.33
Rad50P70388 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad50P70388 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.12■□□□□ 0.33
Rad50P70388 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Gm27618-201ENSMUST00000183671 60 ntBASIC17.12■□□□□ 0.33
Rad50P70388 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.12■□□□□ 0.33
Rad50P70388 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.12■□□□□ 0.33
Rad50P70388 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad50P70388 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad50P70388 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rad50P70388 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.12■□□□□ 0.33
Rad50P70388 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rad50P70388 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rad50P70388 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Rad50P70388 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Rad50P70388 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.11■□□□□ 0.33
Rad50P70388 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.11■□□□□ 0.33
Rad50P70388 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.11■□□□□ 0.33
Rad50P70388 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.11■□□□□ 0.33
Rad50P70388 Gm13223-201ENSMUST00000118609 747 ntBASIC17.11■□□□□ 0.33
Rad50P70388 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.11■□□□□ 0.33
Rad50P70388 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.11■□□□□ 0.33
Rad50P70388 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Gm17837-201ENSMUST00000186435 985 ntBASIC17.11■□□□□ 0.33
Rad50P70388 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.11■□□□□ 0.33
Rad50P70388 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Rad50P70388 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rad50P70388 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.1■□□□□ 0.33
Rad50P70388 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.1■□□□□ 0.33
Rad50P70388 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.1■□□□□ 0.33
Rad50P70388 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rad50P70388 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rad50P70388 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.1■□□□□ 0.33
Rad50P70388 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms