Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm19220-201ENSMUST00000222682 803 ntBASIC14.61□□□□□ -0.07
Ybx1P62960 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.61□□□□□ -0.07
Ybx1P62960 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Ybx1P62960 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ybx1P62960 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ybx1P62960 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ybx1P62960 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Ybx1P62960 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ybx1P62960 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ybx1P62960 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.6□□□□□ -0.07
Ybx1P62960 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.6□□□□□ -0.07
Ybx1P62960 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.6□□□□□ -0.07
Ybx1P62960 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Ybx1P62960 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.6□□□□□ -0.07
Ybx1P62960 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.6□□□□□ -0.07
Ybx1P62960 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.6□□□□□ -0.07
Ybx1P62960 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.6□□□□□ -0.07
Ybx1P62960 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.6□□□□□ -0.07
Ybx1P62960 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ybx1P62960 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ybx1P62960 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.59□□□□□ -0.07
Ybx1P62960 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ybx1P62960 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Ybx1P62960 Gm12341-201ENSMUST00000119724 503 ntBASIC14.59□□□□□ -0.07
Ybx1P62960 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Gm17150-201ENSMUST00000165577 381 ntBASIC14.59□□□□□ -0.07
Ybx1P62960 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.59□□□□□ -0.07
Ybx1P62960 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.59□□□□□ -0.07
Ybx1P62960 Gm6266-201ENSMUST00000203844 806 ntBASIC14.59□□□□□ -0.07
Ybx1P62960 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Gm5035-201ENSMUST00000215581 927 ntBASIC14.59□□□□□ -0.07
Ybx1P62960 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.59□□□□□ -0.07
Ybx1P62960 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.59□□□□□ -0.07
Ybx1P62960 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ybx1P62960 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ybx1P62960 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ybx1P62960 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ybx1P62960 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Ybx1P62960 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ybx1P62960 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ybx1P62960 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ybx1P62960 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ybx1P62960 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Ybx1P62960 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ybx1P62960 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.58□□□□□ -0.08
Ybx1P62960 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.58□□□□□ -0.08
Ybx1P62960 Gm15806-201ENSMUST00000120696 955 ntBASIC14.58□□□□□ -0.08
Ybx1P62960 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.58□□□□□ -0.08
Ybx1P62960 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.58□□□□□ -0.08
Ybx1P62960 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ybx1P62960 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.58□□□□□ -0.08
Ybx1P62960 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.58□□□□□ -0.08
Ybx1P62960 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ybx1P62960 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.58□□□□□ -0.08
Ybx1P62960 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.58□□□□□ -0.08
Ybx1P62960 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms