Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.68□□□□□ -0.38
Sf3b6P59708 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Mir5131-201ENSMUST00000175426 93 ntBASIC12.68□□□□□ -0.38
Sf3b6P59708 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.68□□□□□ -0.38
Sf3b6P59708 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Sf3b6P59708 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sf3b6P59708 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sf3b6P59708 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sf3b6P59708 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.67□□□□□ -0.38
Sf3b6P59708 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.67□□□□□ -0.38
Sf3b6P59708 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Gm6550-201ENSMUST00000187574 993 ntBASIC12.67□□□□□ -0.38
Sf3b6P59708 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Sf3b6P59708 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.67□□□□□ -0.38
Sf3b6P59708 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.67□□□□□ -0.38
Sf3b6P59708 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3b6P59708 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b6P59708 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b6P59708 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms