Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SmoP56726 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SmoP56726 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.34□□□□□ -0.11
SmoP56726 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SmoP56726 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.34□□□□□ -0.11
SmoP56726 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.34□□□□□ -0.11
SmoP56726 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.34□□□□□ -0.11
SmoP56726 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SmoP56726 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SmoP56726 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SmoP56726 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SmoP56726 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SmoP56726 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SmoP56726 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.33□□□□□ -0.12
SmoP56726 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.33□□□□□ -0.12
SmoP56726 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.33□□□□□ -0.12
SmoP56726 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.33□□□□□ -0.12
SmoP56726 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Gm15321-201ENSMUST00000121290 288 ntBASIC14.33□□□□□ -0.12
SmoP56726 Gm12134-201ENSMUST00000122109 520 ntBASIC14.33□□□□□ -0.12
SmoP56726 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.33□□□□□ -0.12
SmoP56726 Gm24694-201ENSMUST00000180054 110 ntBASIC14.33□□□□□ -0.12
SmoP56726 Gm27663-201ENSMUST00000184839 110 ntBASIC14.33□□□□□ -0.12
SmoP56726 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.33□□□□□ -0.12
SmoP56726 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.33□□□□□ -0.12
SmoP56726 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SmoP56726 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.33□□□□□ -0.12
SmoP56726 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Gm12585-201ENSMUST00000117307 290 ntBASIC14.32□□□□□ -0.12
SmoP56726 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Gm16215-201ENSMUST00000161990 637 ntBASIC14.32□□□□□ -0.12
SmoP56726 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SmoP56726 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SmoP56726 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.32□□□□□ -0.12
SmoP56726 Gm7730-201ENSMUST00000212486 454 ntBASIC14.32□□□□□ -0.12
SmoP56726 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.32□□□□□ -0.12
SmoP56726 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Gm2423-201ENSMUST00000074863 733 ntBASIC14.32□□□□□ -0.12
SmoP56726 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
SmoP56726 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SmoP56726 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.32□□□□□ -0.12
SmoP56726 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.32□□□□□ -0.12
SmoP56726 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms