Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Pdx1P52946 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pdx1P52946 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Gm5566-201ENSMUST00000116118 459 ntBASIC14.13□□□□□ -0.15
Pdx1P52946 Gm13616-201ENSMUST00000120600 222 ntBASIC14.13□□□□□ -0.15
Pdx1P52946 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.13□□□□□ -0.15
Pdx1P52946 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.13□□□□□ -0.15
Pdx1P52946 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.13□□□□□ -0.15
Pdx1P52946 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Pdx1P52946 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Pdx1P52946 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Pdx1P52946 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Pdx1P52946 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Pdx1P52946 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.12□□□□□ -0.15
Pdx1P52946 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Pdx1P52946 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.12□□□□□ -0.15
Pdx1P52946 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Pdx1P52946 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.12□□□□□ -0.15
Pdx1P52946 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Gm28630-201ENSMUST00000187806 498 ntBASIC14.12□□□□□ -0.15
Pdx1P52946 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.12□□□□□ -0.15
Pdx1P52946 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.12□□□□□ -0.15
Pdx1P52946 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Pdx1P52946 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Pdx1P52946 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Pdx1P52946 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Pdx1P52946 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.12□□□□□ -0.15
Pdx1P52946 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.11□□□□□ -0.15
Pdx1P52946 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pdx1P52946 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.11□□□□□ -0.15
Pdx1P52946 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Pdx1P52946 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdx1P52946 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Gm8410-201ENSMUST00000117225 605 ntBASIC14.11□□□□□ -0.15
Pdx1P52946 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Gm12882-201ENSMUST00000121696 517 ntBASIC14.11□□□□□ -0.15
Pdx1P52946 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdx1P52946 Gm22175-201ENSMUST00000175007 78 ntBASIC14.11□□□□□ -0.15
Pdx1P52946 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Pdx1P52946 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.11□□□□□ -0.15
Pdx1P52946 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.11□□□□□ -0.15
Pdx1P52946 Gm38294-201ENSMUST00000192831 381 ntBASIC14.11□□□□□ -0.15
Pdx1P52946 Gm45453-201ENSMUST00000211758 853 ntBASIC14.11□□□□□ -0.15
Pdx1P52946 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pdx1P52946 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdx1P52946 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.11□□□□□ -0.15
Pdx1P52946 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.1□□□□□ -0.15
Pdx1P52946 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Pdx1P52946 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pdx1P52946 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms