Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LtbrP50284 Mir1894-201ENSMUST00000122802 81 ntBASIC16.74■□□□□ 0.27
LtbrP50284 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.74■□□□□ 0.27
LtbrP50284 AA619741-201ENSMUST00000195095 646 ntBASIC16.74■□□□□ 0.27
LtbrP50284 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.74■□□□□ 0.27
LtbrP50284 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.74■□□□□ 0.27
LtbrP50284 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.74■□□□□ 0.27
LtbrP50284 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.74■□□□□ 0.27
LtbrP50284 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LtbrP50284 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LtbrP50284 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.74■□□□□ 0.27
LtbrP50284 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LtbrP50284 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LtbrP50284 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LtbrP50284 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.73■□□□□ 0.27
LtbrP50284 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.73■□□□□ 0.27
LtbrP50284 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Gm45098-201ENSMUST00000207179 657 ntBASIC16.73■□□□□ 0.27
LtbrP50284 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.73■□□□□ 0.27
LtbrP50284 Gm17794-201ENSMUST00000220252 955 ntBASIC16.73■□□□□ 0.27
LtbrP50284 CT009764.1-201ENSMUST00000222260 483 ntBASIC16.73■□□□□ 0.27
LtbrP50284 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.73■□□□□ 0.27
LtbrP50284 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.73■□□□□ 0.27
LtbrP50284 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.73■□□□□ 0.27
LtbrP50284 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LtbrP50284 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.72■□□□□ 0.27
LtbrP50284 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.72■□□□□ 0.27
LtbrP50284 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LtbrP50284 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Gm14660-201ENSMUST00000119809 575 ntBASIC16.72■□□□□ 0.27
LtbrP50284 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Mir3547-201ENSMUST00000175461 88 ntBASIC16.72■□□□□ 0.27
LtbrP50284 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LtbrP50284 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LtbrP50284 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LtbrP50284 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.72■□□□□ 0.27
LtbrP50284 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LtbrP50284 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.71■□□□□ 0.27
LtbrP50284 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
LtbrP50284 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
LtbrP50284 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LtbrP50284 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.71■□□□□ 0.27
LtbrP50284 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.71■□□□□ 0.27
LtbrP50284 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms