Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
GdnfP48540 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.52□□□□□ -0.41
GdnfP48540 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.52□□□□□ -0.41
GdnfP48540 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.52□□□□□ -0.41
GdnfP48540 Gm43767-201ENSMUST00000198933 381 ntBASIC12.52□□□□□ -0.41
GdnfP48540 Gm44771-201ENSMUST00000206975 626 ntBASIC12.52□□□□□ -0.41
GdnfP48540 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.52□□□□□ -0.41
GdnfP48540 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.52□□□□□ -0.41
GdnfP48540 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.52□□□□□ -0.41
GdnfP48540 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.52□□□□□ -0.41
GdnfP48540 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
GdnfP48540 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.52□□□□□ -0.41
GdnfP48540 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
GdnfP48540 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GdnfP48540 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
GdnfP48540 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.51□□□□□ -0.41
GdnfP48540 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Gm1401-201ENSMUST00000122048 772 ntBASIC12.51□□□□□ -0.41
GdnfP48540 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.51□□□□□ -0.41
GdnfP48540 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.51□□□□□ -0.41
GdnfP48540 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.51□□□□□ -0.41
GdnfP48540 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.51□□□□□ -0.41
GdnfP48540 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.51□□□□□ -0.41
GdnfP48540 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.51□□□□□ -0.41
GdnfP48540 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.51□□□□□ -0.41
GdnfP48540 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.51□□□□□ -0.41
GdnfP48540 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.51□□□□□ -0.41
GdnfP48540 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
GdnfP48540 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
GdnfP48540 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Rubie-203ENSMUST00000227803 2430 ntBASIC12.51□□□□□ -0.41
GdnfP48540 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GdnfP48540 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GdnfP48540 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GdnfP48540 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GdnfP48540 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.5□□□□□ -0.41
GdnfP48540 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
GdnfP48540 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.5□□□□□ -0.41
GdnfP48540 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
GdnfP48540 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.5□□□□□ -0.41
GdnfP48540 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.5□□□□□ -0.41
GdnfP48540 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.5□□□□□ -0.41
GdnfP48540 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GdnfP48540 AW822252-206ENSMUST00000208904 237 ntBASIC12.5□□□□□ -0.41
GdnfP48540 Gm5364-201ENSMUST00000216789 889 ntBASIC12.5□□□□□ -0.41
GdnfP48540 Psmb5-202ENSMUST00000227257 622 ntBASIC12.5□□□□□ -0.41
GdnfP48540 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms