Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Gm18733-201ENSMUST00000173950 856 ntBASIC13.72□□□□□ -0.21
Prox1P48437 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.72□□□□□ -0.21
Prox1P48437 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Prox1P48437 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prox1P48437 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Prox1P48437 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.71□□□□□ -0.21
Prox1P48437 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Prox1P48437 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.71□□□□□ -0.21
Prox1P48437 Gm11764-201ENSMUST00000120221 623 ntBASIC13.71□□□□□ -0.21
Prox1P48437 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Prox1P48437 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.71□□□□□ -0.21
Prox1P48437 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.71□□□□□ -0.21
Prox1P48437 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prox1P48437 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Prox1P48437 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prox1P48437 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prox1P48437 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prox1P48437 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prox1P48437 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prox1P48437 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Prox1P48437 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Prox1P48437 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prox1P48437 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Prox1P48437 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.7□□□□□ -0.22
Prox1P48437 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.7□□□□□ -0.22
Prox1P48437 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.7□□□□□ -0.22
Prox1P48437 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.7□□□□□ -0.22
Prox1P48437 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.7□□□□□ -0.22
Prox1P48437 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Gm6376-201ENSMUST00000209407 580 ntBASIC13.7□□□□□ -0.22
Prox1P48437 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Prox1P48437 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Prox1P48437 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Prox1P48437 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Prox1P48437 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prox1P48437 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms