Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.06■□□□□ 0.32
Nedd4P46935 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nedd4P46935 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nedd4P46935 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.06■□□□□ 0.32
Nedd4P46935 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.06■□□□□ 0.32
Nedd4P46935 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Nedd4P46935 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.06■□□□□ 0.32
Nedd4P46935 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.06■□□□□ 0.32
Nedd4P46935 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.06■□□□□ 0.32
Nedd4P46935 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.06■□□□□ 0.32
Nedd4P46935 Gm44397-201ENSMUST00000195950 113 ntBASIC17.06■□□□□ 0.32
Nedd4P46935 Mettl6-204ENSMUST00000227595 1027 ntBASIC17.06■□□□□ 0.32
Nedd4P46935 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.06■□□□□ 0.32
Nedd4P46935 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nedd4P46935 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nedd4P46935 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.05■□□□□ 0.32
Nedd4P46935 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nedd4P46935 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Mir877-201ENSMUST00000104738 85 ntBASIC17.05■□□□□ 0.32
Nedd4P46935 Gm15371-201ENSMUST00000117057 784 ntBASIC17.05■□□□□ 0.32
Nedd4P46935 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.05■□□□□ 0.32
Nedd4P46935 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Gm26083-201ENSMUST00000157904 193 ntBASIC17.05■□□□□ 0.32
Nedd4P46935 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Nedd4P46935 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.05■□□□□ 0.32
Nedd4P46935 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.05■□□□□ 0.32
Nedd4P46935 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.05■□□□□ 0.32
Nedd4P46935 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nedd4P46935 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nedd4P46935 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nedd4P46935 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 BC037039-201ENSMUST00000192003 2205 ntBASIC17.05■□□□□ 0.32
Nedd4P46935 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nedd4P46935 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.04■□□□□ 0.32
Nedd4P46935 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Nedd4P46935 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nedd4P46935 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nedd4P46935 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC17.04■□□□□ 0.32
Nedd4P46935 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.04■□□□□ 0.32
Nedd4P46935 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC17.04■□□□□ 0.32
Nedd4P46935 Mir7070-201ENSMUST00000183657 86 ntBASIC17.04■□□□□ 0.32
Nedd4P46935 Gm27331-201ENSMUST00000183705 60 ntBASIC17.04■□□□□ 0.32
Nedd4P46935 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.04■□□□□ 0.32
Nedd4P46935 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Nedd4P46935 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.04■□□□□ 0.32
Nedd4P46935 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Nedd4P46935 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Nedd4P46935 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nedd4P46935 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Nedd4P46935 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.03■□□□□ 0.32
Nedd4P46935 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd4P46935 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd4P46935 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd4P46935 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Nedd4P46935 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Nedd4P46935 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms