Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox18P43680 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox18P43680 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.7□□□□□ -0.22
Sox18P43680 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Mir3547-201ENSMUST00000175461 88 ntBASIC13.7□□□□□ -0.22
Sox18P43680 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.7□□□□□ -0.22
Sox18P43680 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Gm45925-201ENSMUST00000218882 744 ntBASIC13.7□□□□□ -0.22
Sox18P43680 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox18P43680 Mir125a-201ENSMUST00000083545 68 ntBASIC13.7□□□□□ -0.22
Sox18P43680 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.7□□□□□ -0.22
Sox18P43680 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox18P43680 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
Sox18P43680 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.69□□□□□ -0.22
Sox18P43680 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC13.69□□□□□ -0.22
Sox18P43680 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Sox18P43680 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.69□□□□□ -0.22
Sox18P43680 Gm27486-201ENSMUST00000184923 80 ntBASIC13.69□□□□□ -0.22
Sox18P43680 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.69□□□□□ -0.22
Sox18P43680 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Sox18P43680 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.69□□□□□ -0.22
Sox18P43680 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sox18P43680 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox18P43680 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox18P43680 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sox18P43680 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox18P43680 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox18P43680 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox18P43680 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox18P43680 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.68□□□□□ -0.22
Sox18P43680 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.68□□□□□ -0.22
Sox18P43680 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Sox18P43680 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.68□□□□□ -0.22
Sox18P43680 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.68□□□□□ -0.22
Sox18P43680 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.68□□□□□ -0.22
Sox18P43680 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox18P43680 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms