Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm17271-201ENSMUST00000165535 355 ntBASIC14.72□□□□□ -0.05
Msh2P43247 Gm27301-201ENSMUST00000184012 127 ntBASIC14.72□□□□□ -0.05
Msh2P43247 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.72□□□□□ -0.05
Msh2P43247 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.72□□□□□ -0.05
Msh2P43247 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.72□□□□□ -0.05
Msh2P43247 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Msh2P43247 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Msh2P43247 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Msh2P43247 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Msh2P43247 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.71□□□□□ -0.05
Msh2P43247 Gm4995-201ENSMUST00000117247 432 ntBASIC14.71□□□□□ -0.05
Msh2P43247 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.71□□□□□ -0.05
Msh2P43247 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
Msh2P43247 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.71□□□□□ -0.05
Msh2P43247 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.71□□□□□ -0.05
Msh2P43247 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.71□□□□□ -0.05
Msh2P43247 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Msh2P43247 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.71□□□□□ -0.05
Msh2P43247 Gm10154-201ENSMUST00000084445 354 ntBASIC14.71□□□□□ -0.05
Msh2P43247 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Msh2P43247 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.71□□□□□ -0.05
Msh2P43247 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
Msh2P43247 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh2P43247 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.71□□□□□ -0.06
Msh2P43247 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh2P43247 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh2P43247 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh2P43247 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh2P43247 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh2P43247 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Msh2P43247 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Msh2P43247 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.7□□□□□ -0.06
Msh2P43247 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Msh2P43247 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Msh2P43247 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.7□□□□□ -0.06
Msh2P43247 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.7□□□□□ -0.06
Msh2P43247 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.7□□□□□ -0.06
Msh2P43247 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.7□□□□□ -0.06
Msh2P43247 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.7□□□□□ -0.06
Msh2P43247 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.7□□□□□ -0.06
Msh2P43247 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.7□□□□□ -0.06
Msh2P43247 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Msh2P43247 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Msh2P43247 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Msh2P43247 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Msh2P43247 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Msh2P43247 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Msh2P43247 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms