Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx1-2P42580 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx1-2P42580 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx1-2P42580 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.55■□□□□ 0.4
Nkx1-2P42580 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.55■□□□□ 0.4
Nkx1-2P42580 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.55■□□□□ 0.4
Nkx1-2P42580 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.55■□□□□ 0.4
Nkx1-2P42580 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Gm37861-201ENSMUST00000193534 2869 ntBASIC17.55■□□□□ 0.4
Nkx1-2P42580 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx1-2P42580 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.54■□□□□ 0.4
Nkx1-2P42580 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.54■□□□□ 0.4
Nkx1-2P42580 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.54■□□□□ 0.4
Nkx1-2P42580 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx1-2P42580 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.53■□□□□ 0.4
Nkx1-2P42580 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Gm15427-201ENSMUST00000117288 531 ntBASIC17.53■□□□□ 0.4
Nkx1-2P42580 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.53■□□□□ 0.4
Nkx1-2P42580 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.53■□□□□ 0.4
Nkx1-2P42580 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.53■□□□□ 0.4
Nkx1-2P42580 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Nkx1-2P42580 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nkx1-2P42580 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx1-2P42580 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx1-2P42580 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx1-2P42580 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx1-2P42580 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx1-2P42580 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nkx1-2P42580 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx1-2P42580 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms