Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.84□□□□□ -0.19
TfamP40630 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.84□□□□□ -0.19
TfamP40630 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.84□□□□□ -0.19
TfamP40630 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.84□□□□□ -0.19
TfamP40630 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TfamP40630 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.84□□□□□ -0.19
TfamP40630 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TfamP40630 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TfamP40630 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TfamP40630 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.83□□□□□ -0.19
TfamP40630 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TfamP40630 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TfamP40630 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TfamP40630 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
TfamP40630 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TfamP40630 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TfamP40630 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.83□□□□□ -0.2
TfamP40630 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.83□□□□□ -0.2
TfamP40630 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.83□□□□□ -0.2
TfamP40630 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.83□□□□□ -0.2
TfamP40630 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TfamP40630 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.83□□□□□ -0.2
TfamP40630 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.83□□□□□ -0.2
TfamP40630 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.83□□□□□ -0.2
TfamP40630 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TfamP40630 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TfamP40630 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
TfamP40630 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.83□□□□□ -0.2
TfamP40630 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.83□□□□□ -0.2
TfamP40630 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TfamP40630 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TfamP40630 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TfamP40630 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.82□□□□□ -0.2
TfamP40630 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TfamP40630 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TfamP40630 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
TfamP40630 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TfamP40630 Rpph1-201ENSMUST00000175096 319 ntBASIC13.82□□□□□ -0.2
TfamP40630 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TfamP40630 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TfamP40630 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TfamP40630 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms