Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.72□□□□□ -0.53
VhlP40338 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
VhlP40338 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
VhlP40338 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.72□□□□□ -0.53
VhlP40338 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
VhlP40338 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.72□□□□□ -0.53
VhlP40338 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.72□□□□□ -0.53
VhlP40338 Gm24589-201ENSMUST00000116692 94 ntBASIC11.72□□□□□ -0.53
VhlP40338 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.72□□□□□ -0.53
VhlP40338 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.72□□□□□ -0.53
VhlP40338 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
VhlP40338 Gm45747-201ENSMUST00000212203 999 ntBASIC11.72□□□□□ -0.53
VhlP40338 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
VhlP40338 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.72□□□□□ -0.53
VhlP40338 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.72□□□□□ -0.53
VhlP40338 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
VhlP40338 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.72□□□□□ -0.53
VhlP40338 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.72□□□□□ -0.53
VhlP40338 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VhlP40338 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.71□□□□□ -0.53
VhlP40338 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
VhlP40338 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Gm4899-201ENSMUST00000178708 719 ntBASIC11.71□□□□□ -0.53
VhlP40338 Gm6550-201ENSMUST00000187574 993 ntBASIC11.71□□□□□ -0.53
VhlP40338 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.71□□□□□ -0.53
VhlP40338 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.71□□□□□ -0.53
VhlP40338 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
VhlP40338 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VhlP40338 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
VhlP40338 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.71□□□□□ -0.54
VhlP40338 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VhlP40338 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
VhlP40338 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
VhlP40338 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VhlP40338 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VhlP40338 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VhlP40338 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VhlP40338 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.71□□□□□ -0.54
VhlP40338 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.71□□□□□ -0.54
VhlP40338 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VhlP40338 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
VhlP40338 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.7□□□□□ -0.54
VhlP40338 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VhlP40338 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.7□□□□□ -0.54
VhlP40338 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.7□□□□□ -0.54
VhlP40338 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms