Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Fen1P39749 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.38□□□□□ -0.11
Fen1P39749 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Gm6376-201ENSMUST00000209407 580 ntBASIC14.38□□□□□ -0.11
Fen1P39749 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.38□□□□□ -0.11
Fen1P39749 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Fen1P39749 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.38□□□□□ -0.11
Fen1P39749 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
Fen1P39749 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Fen1P39749 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.37□□□□□ -0.11
Fen1P39749 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.37□□□□□ -0.11
Fen1P39749 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.37□□□□□ -0.11
Fen1P39749 Gm18246-201ENSMUST00000221023 728 ntBASIC14.37□□□□□ -0.11
Fen1P39749 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Fen1P39749 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Fen1P39749 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Fen1P39749 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.36□□□□□ -0.11
Fen1P39749 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.36□□□□□ -0.11
Fen1P39749 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Gm25990-201ENSMUST00000102440 86 ntBASIC14.36□□□□□ -0.11
Fen1P39749 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.36□□□□□ -0.11
Fen1P39749 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.36□□□□□ -0.11
Fen1P39749 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Fen1P39749 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.36□□□□□ -0.11
Fen1P39749 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Fen1P39749 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Fen1P39749 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Fen1P39749 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Fen1P39749 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Fen1P39749 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Fen1P39749 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.35□□□□□ -0.11
Fen1P39749 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms