Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh4P39038 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh4P39038 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdh4P39038 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh4P39038 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.69□□□□□ -0.22
Cdh4P39038 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdh4P39038 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh4P39038 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.69□□□□□ -0.22
Cdh4P39038 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh4P39038 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdh4P39038 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cdh4P39038 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.68□□□□□ -0.22
Cdh4P39038 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh4P39038 Gm5566-201ENSMUST00000116118 459 ntBASIC13.68□□□□□ -0.22
Cdh4P39038 Gm6222-201ENSMUST00000120787 396 ntBASIC13.68□□□□□ -0.22
Cdh4P39038 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh4P39038 Gm9719-201ENSMUST00000162765 543 ntBASIC13.68□□□□□ -0.22
Cdh4P39038 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdh4P39038 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdh4P39038 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cdh4P39038 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdh4P39038 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdh4P39038 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdh4P39038 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.67□□□□□ -0.22
Cdh4P39038 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.67□□□□□ -0.22
Cdh4P39038 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdh4P39038 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdh4P39038 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cdh4P39038 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdh4P39038 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cdh4P39038 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.67□□□□□ -0.22
Cdh4P39038 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdh4P39038 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cdh4P39038 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdh4P39038 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Cdh4P39038 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.66□□□□□ -0.22
Cdh4P39038 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.66□□□□□ -0.22
Cdh4P39038 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.66□□□□□ -0.22
Cdh4P39038 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdh4P39038 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdh4P39038 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdh4P39038 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.66□□□□□ -0.22
Cdh4P39038 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdh4P39038 Gm28630-201ENSMUST00000187806 498 ntBASIC13.66□□□□□ -0.22
Cdh4P39038 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdh4P39038 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.66□□□□□ -0.22
Cdh4P39038 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.66□□□□□ -0.22
Cdh4P39038 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms