Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.06■□□□□ 0
Rfc1P35601 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.06■□□□□ 0
Rfc1P35601 Gm34391-201ENSMUST00000203706 907 ntBASIC15.06■□□□□ 0
Rfc1P35601 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Rfc1P35601 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rfc1P35601 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rfc1P35601 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.06■□□□□ 0
Rfc1P35601 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Rfc1P35601 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rfc1P35601 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rfc1P35601 Gm11780-201ENSMUST00000136880 516 ntBASIC15.05■□□□□ -0
Rfc1P35601 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.05■□□□□ -0
Rfc1P35601 Birc2-201ENSMUST00000054878 378 ntBASIC15.05■□□□□ -0
Rfc1P35601 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.05■□□□□ -0
Rfc1P35601 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rfc1P35601 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfc1P35601 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rfc1P35601 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Rfc1P35601 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.04■□□□□ -0
Rfc1P35601 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.04■□□□□ -0
Rfc1P35601 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.04■□□□□ -0
Rfc1P35601 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.04■□□□□ -0
Rfc1P35601 Gm27646-201ENSMUST00000183989 110 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44357-201ENSMUST00000195897 142 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm19658-201ENSMUST00000196231 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44367-201ENSMUST00000196836 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44350-201ENSMUST00000197197 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44390-201ENSMUST00000197533 144 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44313-201ENSMUST00000198018 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44486-201ENSMUST00000198508 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44314-201ENSMUST00000199263 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44394-201ENSMUST00000199558 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44484-201ENSMUST00000199873 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44466-201ENSMUST00000200264 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 Gm44359-201ENSMUST00000200671 138 ntBASIC15.04■□□□□ -0
Rfc1P35601 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Gm18041-201ENSMUST00000218210 618 ntBASIC15.04■□□□□ -0
Rfc1P35601 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.04■□□□□ -0
Rfc1P35601 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rfc1P35601 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC15.04■□□□□ -0
Rfc1P35601 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.04■□□□□ -0
Rfc1P35601 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.04■□□□□ -0
Rfc1P35601 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rfc1P35601 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Rfc1P35601 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rfc1P35601 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.03■□□□□ -0
Rfc1P35601 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.03■□□□□ -0
Rfc1P35601 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Rfc1P35601 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rfc1P35601 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.03■□□□□ -0
Rfc1P35601 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.03■□□□□ -0
Rfc1P35601 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rfc1P35601 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms