Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sftpa1P35242 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.13□□□□□ -0.31
Sftpa1P35242 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.13□□□□□ -0.31
Sftpa1P35242 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.13□□□□□ -0.31
Sftpa1P35242 Snora78-201ENSMUST00000158630 128 ntBASIC13.13□□□□□ -0.31
Sftpa1P35242 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.13□□□□□ -0.31
Sftpa1P35242 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Gm27731-201ENSMUST00000185192 107 ntBASIC13.13□□□□□ -0.31
Sftpa1P35242 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Gm8463-201ENSMUST00000208573 613 ntBASIC13.13□□□□□ -0.31
Sftpa1P35242 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.13□□□□□ -0.31
Sftpa1P35242 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.13□□□□□ -0.31
Sftpa1P35242 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Sftpa1P35242 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sftpa1P35242 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.12□□□□□ -0.31
Sftpa1P35242 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sftpa1P35242 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm4804-201ENSMUST00000182234 999 ntBASIC13.12□□□□□ -0.31
Sftpa1P35242 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.12□□□□□ -0.31
Sftpa1P35242 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm7561-201ENSMUST00000211203 886 ntBASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.12□□□□□ -0.31
Sftpa1P35242 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sftpa1P35242 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.12□□□□□ -0.31
Sftpa1P35242 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sftpa1P35242 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.12□□□□□ -0.31
Sftpa1P35242 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sftpa1P35242 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.12□□□□□ -0.31
Sftpa1P35242 Sybu-209ENSMUST00000228639 4113 ntBASIC13.11□□□□□ -0.31
Sftpa1P35242 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Sftpa1P35242 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.11□□□□□ -0.31
Sftpa1P35242 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sftpa1P35242 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Sftpa1P35242 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.11□□□□□ -0.31
Sftpa1P35242 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sftpa1P35242 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms