Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Rom1P32958 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rom1P32958 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.28□□□□□ -0.6
Rom1P32958 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.28□□□□□ -0.6
Rom1P32958 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rom1P32958 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Rom1P32958 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Rom1P32958 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rom1P32958 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Rom1P32958 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.28□□□□□ -0.6
Rom1P32958 Gm12644-201ENSMUST00000119935 606 ntBASIC11.28□□□□□ -0.6
Rom1P32958 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.28□□□□□ -0.6
Rom1P32958 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.28□□□□□ -0.6
Rom1P32958 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.28□□□□□ -0.6
Rom1P32958 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Rom1P32958 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.28□□□□□ -0.6
Rom1P32958 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rom1P32958 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rom1P32958 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.28□□□□□ -0.6
Rom1P32958 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.28□□□□□ -0.6
Rom1P32958 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.28□□□□□ -0.6
Rom1P32958 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Rom1P32958 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.28□□□□□ -0.6
Rom1P32958 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rom1P32958 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rom1P32958 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rom1P32958 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rom1P32958 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.27□□□□□ -0.6
Rom1P32958 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rom1P32958 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rom1P32958 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rom1P32958 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.27□□□□□ -0.6
Rom1P32958 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rom1P32958 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rom1P32958 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.27□□□□□ -0.61
Rom1P32958 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.27□□□□□ -0.61
Rom1P32958 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.27□□□□□ -0.61
Rom1P32958 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.27□□□□□ -0.61
Rom1P32958 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rom1P32958 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.27□□□□□ -0.61
Rom1P32958 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.27□□□□□ -0.61
Rom1P32958 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rom1P32958 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.27□□□□□ -0.61
Rom1P32958 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rom1P32958 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms