Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl6P27784 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl6P27784 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl6P27784 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.16□□□□□ -0.62
Ccl6P27784 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccl6P27784 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl6P27784 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl6P27784 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccl6P27784 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccl6P27784 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccl6P27784 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccl6P27784 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ccl6P27784 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccl6P27784 Gm6973-201ENSMUST00000117080 721 ntBASIC11.15□□□□□ -0.62
Ccl6P27784 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccl6P27784 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Gm45098-201ENSMUST00000207179 657 ntBASIC11.15□□□□□ -0.62
Ccl6P27784 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Ccl6P27784 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccl6P27784 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl6P27784 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl6P27784 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl6P27784 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl6P27784 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccl6P27784 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Ccl6P27784 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccl6P27784 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccl6P27784 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccl6P27784 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccl6P27784 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl6P27784 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccl6P27784 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Gm5479-201ENSMUST00000160578 435 ntBASIC11.14□□□□□ -0.63
Ccl6P27784 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccl6P27784 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl6P27784 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.14□□□□□ -0.63
Ccl6P27784 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccl6P27784 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccl6P27784 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccl6P27784 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccl6P27784 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccl6P27784 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.14□□□□□ -0.63
Ccl6P27784 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccl6P27784 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccl6P27784 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 147.2 ms