Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cbx3P23198 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cbx3P23198 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cbx3P23198 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cbx3P23198 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Gm25016-201ENSMUST00000158399 131 ntBASIC13.02□□□□□ -0.33
Cbx3P23198 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cbx3P23198 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Cbx3P23198 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Gm9987-201ENSMUST00000069768 567 ntBASIC13.02□□□□□ -0.33
Cbx3P23198 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.02□□□□□ -0.33
Cbx3P23198 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cbx3P23198 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.01□□□□□ -0.33
Cbx3P23198 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cbx3P23198 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Cbx3P23198 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cbx3P23198 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.01□□□□□ -0.33
Cbx3P23198 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cbx3P23198 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cbx3P23198 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cbx3P23198 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13□□□□□ -0.33
Cbx3P23198 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13□□□□□ -0.33
Cbx3P23198 Gm40377-201ENSMUST00000204604 2015 ntBASIC13□□□□□ -0.33
Cbx3P23198 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13□□□□□ -0.33
Cbx3P23198 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Cbx3P23198 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13□□□□□ -0.33
Cbx3P23198 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cbx3P23198 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Cbx3P23198 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cbx3P23198 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cbx3P23198 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cbx3P23198 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cbx3P23198 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cbx3P23198 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cbx3P23198 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cbx3P23198 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.99□□□□□ -0.33
Cbx3P23198 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cbx3P23198 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.99□□□□□ -0.33
Cbx3P23198 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cbx3P23198 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms