Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Gm12134-201ENSMUST00000122109 520 ntBASIC13.34□□□□□ -0.27
Clk1P22518 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Clk1P22518 Gm9726-201ENSMUST00000180321 678 ntBASIC13.34□□□□□ -0.27
Clk1P22518 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Gm9182-201ENSMUST00000217829 639 ntBASIC13.34□□□□□ -0.27
Clk1P22518 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.34□□□□□ -0.27
Clk1P22518 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.34□□□□□ -0.27
Clk1P22518 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.34□□□□□ -0.27
Clk1P22518 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Clk1P22518 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Clk1P22518 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Clk1P22518 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clk1P22518 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Clk1P22518 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.34□□□□□ -0.27
Clk1P22518 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clk1P22518 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clk1P22518 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clk1P22518 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clk1P22518 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clk1P22518 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clk1P22518 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.33□□□□□ -0.28
Clk1P22518 Gm9385-201ENSMUST00000117563 472 ntBASIC13.33□□□□□ -0.28
Clk1P22518 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.33□□□□□ -0.28
Clk1P22518 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.33□□□□□ -0.28
Clk1P22518 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.33□□□□□ -0.28
Clk1P22518 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.33□□□□□ -0.28
Clk1P22518 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.33□□□□□ -0.28
Clk1P22518 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.33□□□□□ -0.28
Clk1P22518 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.33□□□□□ -0.28
Clk1P22518 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clk1P22518 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.33□□□□□ -0.28
Clk1P22518 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
Clk1P22518 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.32□□□□□ -0.28
Clk1P22518 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Clk1P22518 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Clk1P22518 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Gm11543-201ENSMUST00000120758 370 ntBASIC13.32□□□□□ -0.28
Clk1P22518 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.32□□□□□ -0.28
Clk1P22518 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.32□□□□□ -0.28
Clk1P22518 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clk1P22518 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clk1P22518 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clk1P22518 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.32□□□□□ -0.28
Clk1P22518 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Clk1P22518 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clk1P22518 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms