Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
BdnfP21237 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.71□□□□□ -0.21
BdnfP21237 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.71□□□□□ -0.21
BdnfP21237 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.71□□□□□ -0.21
BdnfP21237 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.71□□□□□ -0.21
BdnfP21237 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.71□□□□□ -0.21
BdnfP21237 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.71□□□□□ -0.21
BdnfP21237 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.71□□□□□ -0.21
BdnfP21237 Olfr286-202ENSMUST00000205305 969 ntBASIC13.71□□□□□ -0.21
BdnfP21237 Mzt1-203ENSMUST00000227948 952 ntBASIC13.71□□□□□ -0.21
BdnfP21237 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
BdnfP21237 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
BdnfP21237 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
BdnfP21237 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
BdnfP21237 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
BdnfP21237 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
BdnfP21237 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
BdnfP21237 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
BdnfP21237 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
BdnfP21237 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
BdnfP21237 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
BdnfP21237 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.71□□□□□ -0.22
BdnfP21237 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.7□□□□□ -0.22
BdnfP21237 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
BdnfP21237 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
BdnfP21237 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
BdnfP21237 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.7□□□□□ -0.22
BdnfP21237 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.7□□□□□ -0.22
BdnfP21237 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.7□□□□□ -0.22
BdnfP21237 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.7□□□□□ -0.22
BdnfP21237 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.7□□□□□ -0.22
BdnfP21237 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.7□□□□□ -0.22
BdnfP21237 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.7□□□□□ -0.22
BdnfP21237 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.7□□□□□ -0.22
BdnfP21237 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
BdnfP21237 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.7□□□□□ -0.22
BdnfP21237 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
BdnfP21237 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.69□□□□□ -0.22
BdnfP21237 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
BdnfP21237 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.69□□□□□ -0.22
BdnfP21237 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.69□□□□□ -0.22
BdnfP21237 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.69□□□□□ -0.22
BdnfP21237 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
BdnfP21237 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
BdnfP21237 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.68□□□□□ -0.22
BdnfP21237 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms