Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.53□□□□□ -0.08
Hmga1P17095 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Hmga1P17095 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.53□□□□□ -0.08
Hmga1P17095 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Hmga1P17095 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.53□□□□□ -0.08
Hmga1P17095 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Mir6392-201ENSMUST00000184924 108 ntBASIC14.53□□□□□ -0.08
Hmga1P17095 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Gm5425-201ENSMUST00000214125 459 ntBASIC14.53□□□□□ -0.08
Hmga1P17095 Gm19220-201ENSMUST00000222682 803 ntBASIC14.53□□□□□ -0.08
Hmga1P17095 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.53□□□□□ -0.08
Hmga1P17095 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.53□□□□□ -0.08
Hmga1P17095 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Hmga1P17095 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.52□□□□□ -0.08
Hmga1P17095 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Hmga1P17095 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Hmga1P17095 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Hmga1P17095 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.52□□□□□ -0.08
Hmga1P17095 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.52□□□□□ -0.09
Hmga1P17095 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Hmga1P17095 Gm12091-201ENSMUST00000146791 830 ntBASIC14.52□□□□□ -0.09
Hmga1P17095 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.52□□□□□ -0.09
Hmga1P17095 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Hmga1P17095 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Hmga1P17095 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.52□□□□□ -0.09
Hmga1P17095 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Hmga1P17095 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Hmga1P17095 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmga1P17095 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.51□□□□□ -0.09
Hmga1P17095 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.51□□□□□ -0.09
Hmga1P17095 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.51□□□□□ -0.09
Hmga1P17095 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Hmga1P17095 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Hmga1P17095 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmga1P17095 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.51□□□□□ -0.09
Hmga1P17095 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.51□□□□□ -0.09
Hmga1P17095 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Hmga1P17095 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Hmga1P17095 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Hmga1P17095 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga1P17095 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga1P17095 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga1P17095 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Hmga1P17095 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Hmga1P17095 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga1P17095 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga1P17095 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Hmga1P17095 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Hmga1P17095 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms