Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.56□□□□□ -0.4
Ccl3P10855 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccl3P10855 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Ccl3P10855 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccl3P10855 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.55□□□□□ -0.4
Ccl3P10855 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccl3P10855 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ccl3P10855 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Ccl3P10855 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Gm27486-201ENSMUST00000184923 80 ntBASIC12.55□□□□□ -0.4
Ccl3P10855 Mir6420-201ENSMUST00000185032 102 ntBASIC12.55□□□□□ -0.4
Ccl3P10855 Gm43094-201ENSMUST00000196549 921 ntBASIC12.55□□□□□ -0.4
Ccl3P10855 Gm19078-201ENSMUST00000206311 727 ntBASIC12.55□□□□□ -0.4
Ccl3P10855 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.55□□□□□ -0.4
Ccl3P10855 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.55□□□□□ -0.4
Ccl3P10855 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ccl3P10855 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.55□□□□□ -0.4
Ccl3P10855 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ccl3P10855 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ccl3P10855 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl3P10855 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl3P10855 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccl3P10855 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl3P10855 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl3P10855 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Gm12957-201ENSMUST00000117835 377 ntBASIC12.54□□□□□ -0.4
Ccl3P10855 Gm11524-201ENSMUST00000119349 807 ntBASIC12.54□□□□□ -0.4
Ccl3P10855 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Gm15429-201ENSMUST00000151268 798 ntBASIC12.54□□□□□ -0.4
Ccl3P10855 Gm45841-201ENSMUST00000207700 164 ntBASIC12.54□□□□□ -0.4
Ccl3P10855 Gm8463-201ENSMUST00000208573 613 ntBASIC12.54□□□□□ -0.4
Ccl3P10855 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccl3P10855 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.54□□□□□ -0.4
Ccl3P10855 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccl3P10855 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccl3P10855 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccl3P10855 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccl3P10855 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccl3P10855 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Ccl3P10855 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms