Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxc6P10629 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxc6P10629 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxc6P10629 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxc6P10629 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hoxc6P10629 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hoxc6P10629 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.76■□□□□ 0.11
Hoxc6P10629 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.76■□□□□ 0.11
Hoxc6P10629 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hoxc6P10629 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm13392-201ENSMUST00000117708 150 ntBASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm11524-201ENSMUST00000119349 807 ntBASIC15.76■□□□□ 0.11
Hoxc6P10629 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm15429-201ENSMUST00000151268 798 ntBASIC15.76■□□□□ 0.11
Hoxc6P10629 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm43094-201ENSMUST00000196549 921 ntBASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Hoxc6P10629 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Gm7561-201ENSMUST00000211203 886 ntBASIC15.76■□□□□ 0.11
Hoxc6P10629 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Hoxc6P10629 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hoxc6P10629 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Hoxc6P10629 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Sybu-209ENSMUST00000228639 4113 ntBASIC15.75■□□□□ 0.11
Hoxc6P10629 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.75■□□□□ 0.11
Hoxc6P10629 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.75■□□□□ 0.11
Hoxc6P10629 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Hoxc6P10629 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Gm14660-201ENSMUST00000119809 575 ntBASIC15.75■□□□□ 0.11
Hoxc6P10629 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Hoxc6P10629 Gm37424-201ENSMUST00000191727 561 ntBASIC15.75■□□□□ 0.11
Hoxc6P10629 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.75■□□□□ 0.11
Hoxc6P10629 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.75■□□□□ 0.11
Hoxc6P10629 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
Hoxc6P10629 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Hoxc6P10629 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hoxc6P10629 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Hoxc6P10629 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hoxc6P10629 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Hoxc6P10629 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.74■□□□□ 0.11
Hoxc6P10629 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Hoxc6P10629 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.74■□□□□ 0.11
Hoxc6P10629 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Hoxc6P10629 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.74■□□□□ 0.11
Hoxc6P10629 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.74■□□□□ 0.11
Hoxc6P10629 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Hoxc6P10629 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Hoxc6P10629 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.74■□□□□ 0.11
Hoxc6P10629 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.74■□□□□ 0.11
Hoxc6P10629 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hoxc6P10629 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms