Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col3a1P08121 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Col3a1P08121 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.84■□□□□ 0.29
Col3a1P08121 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col3a1P08121 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.84■□□□□ 0.29
Col3a1P08121 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.84■□□□□ 0.29
Col3a1P08121 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.84■□□□□ 0.29
Col3a1P08121 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.84■□□□□ 0.29
Col3a1P08121 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.84■□□□□ 0.29
Col3a1P08121 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col3a1P08121 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Col3a1P08121 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Col3a1P08121 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Col3a1P08121 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col3a1P08121 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col3a1P08121 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col3a1P08121 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col3a1P08121 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Gm43630-201ENSMUST00000201550 776 ntBASIC16.83■□□□□ 0.28
Col3a1P08121 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.83■□□□□ 0.28
Col3a1P08121 Gm6983-201ENSMUST00000214912 628 ntBASIC16.83■□□□□ 0.28
Col3a1P08121 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.83■□□□□ 0.28
Col3a1P08121 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col3a1P08121 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.83■□□□□ 0.28
Col3a1P08121 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Col3a1P08121 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.83■□□□□ 0.28
Col3a1P08121 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col3a1P08121 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col3a1P08121 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.82■□□□□ 0.28
Col3a1P08121 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col3a1P08121 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.82■□□□□ 0.28
Col3a1P08121 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Col3a1P08121 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col3a1P08121 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Mir698-201ENSMUST00000102164 109 ntBASIC16.82■□□□□ 0.28
Col3a1P08121 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.82■□□□□ 0.28
Col3a1P08121 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.82■□□□□ 0.28
Col3a1P08121 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.82■□□□□ 0.28
Col3a1P08121 Gm7287-201ENSMUST00000205267 602 ntBASIC16.82■□□□□ 0.28
Col3a1P08121 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col3a1P08121 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.82■□□□□ 0.28
Col3a1P08121 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.82■□□□□ 0.28
Col3a1P08121 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col3a1P08121 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col3a1P08121 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Col3a1P08121 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col3a1P08121 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.81■□□□□ 0.28
Col3a1P08121 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.81■□□□□ 0.28
Col3a1P08121 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.81■□□□□ 0.28
Col3a1P08121 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC16.81■□□□□ 0.28
Col3a1P08121 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.81■□□□□ 0.28
Col3a1P08121 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.81■□□□□ 0.28
Col3a1P08121 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col3a1P08121 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col3a1P08121 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.81■□□□□ 0.28
Col3a1P08121 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col3a1P08121 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col3a1P08121 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms