Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.74□□□□□ -0.37
P06344 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
P06344 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
P06344 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P06344 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
P06344 Gm12151-201ENSMUST00000121374 290 ntBASIC12.73□□□□□ -0.37
P06344 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.73□□□□□ -0.37
P06344 Gm27306-201ENSMUST00000183970 107 ntBASIC12.73□□□□□ -0.37
P06344 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.73□□□□□ -0.37
P06344 Gm44344-201ENSMUST00000200287 129 ntBASIC12.73□□□□□ -0.37
P06344 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Dupd1-202ENSMUST00000224735 548 ntBASIC12.73□□□□□ -0.37
P06344 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.73□□□□□ -0.37
P06344 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.73□□□□□ -0.37
P06344 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
P06344 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.73□□□□□ -0.37
P06344 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P06344 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P06344 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.73□□□□□ -0.37
P06344 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.72□□□□□ -0.37
P06344 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P06344 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.72□□□□□ -0.37
P06344 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P06344 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.72□□□□□ -0.37
P06344 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P06344 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.72□□□□□ -0.37
P06344 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P06344 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.72□□□□□ -0.37
P06344 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
P06344 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P06344 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.72□□□□□ -0.37
P06344 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P06344 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.71□□□□□ -0.37
P06344 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
P06344 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
P06344 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
P06344 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.71□□□□□ -0.37
P06344 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P06344 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.71□□□□□ -0.37
P06344 Gm10275-202ENSMUST00000168697 495 ntBASIC12.71□□□□□ -0.37
P06344 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms