Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P04224 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.55□□□□□ -0.4
P04224 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.55□□□□□ -0.4
P04224 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.55□□□□□ -0.4
P04224 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
P04224 Gm12644-201ENSMUST00000119935 606 ntBASIC12.55□□□□□ -0.4
P04224 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.55□□□□□ -0.4
P04224 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.55□□□□□ -0.4
P04224 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
P04224 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
P04224 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.55□□□□□ -0.4
P04224 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P04224 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
P04224 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
P04224 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.54□□□□□ -0.4
P04224 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P04224 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Gm12895-201ENSMUST00000122214 226 ntBASIC12.54□□□□□ -0.4
P04224 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Gm10499-201ENSMUST00000174094 934 ntBASIC12.54□□□□□ -0.4
P04224 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Gm33142-201ENSMUST00000193913 867 ntBASIC12.54□□□□□ -0.4
P04224 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.54□□□□□ -0.4
P04224 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
P04224 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.54□□□□□ -0.4
P04224 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.54□□□□□ -0.4
P04224 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
P04224 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.54□□□□□ -0.4
P04224 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
P04224 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
P04224 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
P04224 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.53□□□□□ -0.4
P04224 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.53□□□□□ -0.4
P04224 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
P04224 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
P04224 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Gm14859-201ENSMUST00000117752 357 ntBASIC12.53□□□□□ -0.4
P04224 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
P04224 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
P04224 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.53□□□□□ -0.4
P04224 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
P04224 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms