Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P01643 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01643 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.34□□□□□ -0.59
P01643 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01643 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01643 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01643 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P01643 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
P01643 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
P01643 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
P01643 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.33□□□□□ -0.59
P01643 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.33□□□□□ -0.6
P01643 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.33□□□□□ -0.6
P01643 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.33□□□□□ -0.6
P01643 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.33□□□□□ -0.6
P01643 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.33□□□□□ -0.6
P01643 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P01643 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.33□□□□□ -0.6
P01643 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.33□□□□□ -0.6
P01643 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P01643 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.33□□□□□ -0.6
P01643 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
P01643 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
P01643 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
P01643 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
P01643 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.33□□□□□ -0.6
P01643 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
P01643 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P01643 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.32□□□□□ -0.6
P01643 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
P01643 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
P01643 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.32□□□□□ -0.6
P01643 Gm15957-201ENSMUST00000118893 974 ntBASIC11.32□□□□□ -0.6
P01643 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.32□□□□□ -0.6
P01643 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.32□□□□□ -0.6
P01643 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Gm21854-201ENSMUST00000179901 471 ntBASIC11.32□□□□□ -0.6
P01643 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.32□□□□□ -0.6
P01643 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
P01643 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Gm9797-201ENSMUST00000052902 613 ntBASIC11.32□□□□□ -0.6
P01643 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P01643 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.32□□□□□ -0.6
P01643 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
P01643 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01643 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01643 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.31□□□□□ -0.6
P01643 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01643 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01643 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01643 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P01643 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01643 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P01643 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
P01643 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01643 Gm14928-201ENSMUST00000120198 477 ntBASIC11.31□□□□□ -0.6
P01643 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.31□□□□□ -0.6
P01643 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.31□□□□□ -0.6
P01643 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.31□□□□□ -0.6
P01643 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01643 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.31□□□□□ -0.6
P01643 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms