Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nid2O88322 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nid2O88322 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nid2O88322 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nid2O88322 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nid2O88322 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nid2O88322 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nid2O88322 Mir3102-201ENSMUST00000175555 104 ntBASIC18.32■□□□□ 0.52
Nid2O88322 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC18.32■□□□□ 0.52
Nid2O88322 Gm5161-201ENSMUST00000075243 853 ntBASIC18.32■□□□□ 0.52
Nid2O88322 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nid2O88322 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nid2O88322 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nid2O88322 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Efs-202ENSMUST00000227037 2540 ntBASIC18.31■□□□□ 0.52
Nid2O88322 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Gm5687-201ENSMUST00000118252 640 ntBASIC18.31■□□□□ 0.52
Nid2O88322 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC18.31■□□□□ 0.52
Nid2O88322 Gm27516-201ENSMUST00000184237 98 ntBASIC18.31■□□□□ 0.52
Nid2O88322 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.31■□□□□ 0.52
Nid2O88322 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nid2O88322 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Nid2O88322 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.3■□□□□ 0.52
Nid2O88322 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Gm15236-201ENSMUST00000117309 379 ntBASIC18.3■□□□□ 0.52
Nid2O88322 Gm1335-201ENSMUST00000121653 386 ntBASIC18.3■□□□□ 0.52
Nid2O88322 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC18.3■□□□□ 0.52
Nid2O88322 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Gm27501-201ENSMUST00000183599 107 ntBASIC18.3■□□□□ 0.52
Nid2O88322 Gm38266-201ENSMUST00000194931 421 ntBASIC18.3■□□□□ 0.52
Nid2O88322 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nid2O88322 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Nid2O88322 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.29■□□□□ 0.52
Nid2O88322 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC18.29■□□□□ 0.52
Nid2O88322 Gm29741-201ENSMUST00000192667 421 ntBASIC18.29■□□□□ 0.52
Nid2O88322 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Gm43133-201ENSMUST00000197472 463 ntBASIC18.29■□□□□ 0.52
Nid2O88322 AC073947.2-201ENSMUST00000215888 1130 ntBASIC18.29■□□□□ 0.52
Nid2O88322 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Gm24526-201ENSMUST00000082921 158 ntBASIC18.29■□□□□ 0.52
Nid2O88322 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.29■□□□□ 0.52
Nid2O88322 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nid2O88322 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nid2O88322 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC18.28■□□□□ 0.52
Nid2O88322 Gm11793-201ENSMUST00000120433 981 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms