Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Npc1O35604 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Npc1O35604 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Npc1O35604 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.95□□□□□ -0.18
Npc1O35604 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Npc1O35604 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Gm37230-201ENSMUST00000194491 818 ntBASIC13.95□□□□□ -0.18
Npc1O35604 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.95□□□□□ -0.18
Npc1O35604 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npc1O35604 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.94□□□□□ -0.18
Npc1O35604 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Npc1O35604 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Npc1O35604 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Npc1O35604 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Gm14767-201ENSMUST00000121559 586 ntBASIC13.94□□□□□ -0.18
Npc1O35604 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.94□□□□□ -0.18
Npc1O35604 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Npc1O35604 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Npc1O35604 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Npc1O35604 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Npc1O35604 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.94□□□□□ -0.18
Npc1O35604 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.94□□□□□ -0.18
Npc1O35604 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.94□□□□□ -0.18
Npc1O35604 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Npc1O35604 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.94□□□□□ -0.18
Npc1O35604 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npc1O35604 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npc1O35604 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Npc1O35604 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Npc1O35604 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Npc1O35604 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npc1O35604 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.93□□□□□ -0.18
Npc1O35604 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npc1O35604 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Npc1O35604 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Npc1O35604 Gm29310-201ENSMUST00000185468 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21825-201ENSMUST00000185728 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm29109-201ENSMUST00000185895 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21896-201ENSMUST00000186520 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21873-201ENSMUST00000186728 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21794-201ENSMUST00000187056 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21880-201ENSMUST00000187275 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.93□□□□□ -0.18
Npc1O35604 Gm21826-201ENSMUST00000187451 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21198-201ENSMUST00000188393 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21749-201ENSMUST00000189343 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21901-201ENSMUST00000189568 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm29424-201ENSMUST00000189716 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm28599-201ENSMUST00000189838 694 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21867-201ENSMUST00000189917 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm29269-201ENSMUST00000190087 696 ntBASIC13.93□□□□□ -0.18
Npc1O35604 Gm21722-201ENSMUST00000190153 696 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms