Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.44□□□□□ -0.26
Cx3cl1O35188 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Gm18766-201ENSMUST00000189811 808 ntBASIC13.44□□□□□ -0.26
Cx3cl1O35188 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cx3cl1O35188 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.43□□□□□ -0.26
Cx3cl1O35188 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.43□□□□□ -0.26
Cx3cl1O35188 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Gm6415-201ENSMUST00000118488 348 ntBASIC13.43□□□□□ -0.26
Cx3cl1O35188 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Gm22175-201ENSMUST00000175007 78 ntBASIC13.43□□□□□ -0.26
Cx3cl1O35188 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cx3cl1O35188 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm13823-201ENSMUST00000119930 345 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm14042-201ENSMUST00000120139 833 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm29310-201ENSMUST00000185468 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21825-201ENSMUST00000185728 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm29109-201ENSMUST00000185895 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21896-201ENSMUST00000186520 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21873-201ENSMUST00000186728 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21794-201ENSMUST00000187056 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21880-201ENSMUST00000187275 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21826-201ENSMUST00000187451 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21198-201ENSMUST00000188393 696 ntBASIC13.42□□□□□ -0.26
Cx3cl1O35188 Gm21749-201ENSMUST00000189343 696 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms